Berlin 2024 – wissenschaftliches Programm
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BP: Fachverband Biologische Physik
BP 21: Poster IIIb
Mittwoch, 20. März 2024, 11:00–14:30, Poster C
Computational Biophysics, Protein Structure and Dynamics, Synthetic Life-like Systems and Origins of Life
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11:00 | BP 21.1 | Contact Maps in RNA Structure Prediction — •Christian Faber, Utkarsh Upadhyay, Benjamin Kotton, and Alexander Schug |
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11:00 | BP 21.2 | Expanding the scope of bulk experiments by ensemble signal decomposition — •Nadin Haase, Simon Christ, and Sophia Rudorf |
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11:00 | BP 21.3 | Implementation and Implications of a Lattice Model for the Understanding of Lipid Rafts in Membranes — •Simon Kellers, Fabian Keller, and Andreas Heuer |
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11:00 | BP 21.4 | Reversible formation of von willebrand factor platelet aggregates in blood flow — •Alper Topuz, Gerhard Gompper, and Dmitry A. Fedosov |
| 11:00 | BP 21.5 | The contribution has been withdrawn. | |
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11:00 | BP 21.6 | Red blood cells adhesion and its Influence on capillary Flow in-vivo Microvasculature: A Simulation Study — •Mohammed Bendaoud, Alexis Darras, Yazdan Rashidi, Christian Wagner, and Chaouqi Misbah |
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11:00 | BP 21.7 | Simulating tumor-induced angiogenesis using Cells in Silico — •Eric Behle, Julian Herold, and Alexander Schug |
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11:00 | BP 21.8 | Developing coarse graining RNA force fields via Machine Learning — •Anton Dorn and Alexander Schug |
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11:00 | BP 21.9 | Flexible patchy particles for modelling biomolecular condensates — •Alena Taskina, Simon Dannenberg, and Stefan Klumpp |
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11:00 | BP 21.10 | Free energy calculations of drug permeation through the bacterial outer membranes — •Vasily Unguryan and Jochen Hub |
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11:00 | BP 21.11 | Dynamical and kinetic assessment of nucleic acid systems by CG simulations — •Lorenzo Petrolli, Manuel Micheloni, and Giovanni Mattiotti |
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11:00 | BP 21.12 | A Bio-inspired Agent-based Model for Collective Shepherding — •yating zheng and pawel romanczuk |
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11:00 | BP 21.13 | Application of similarity measures to MD simulation data — •Fabian Schuhmann, Leonie Ryvkin, James D. McLaren, Luca Gerhards, and Ilia A. Solov’yov |
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11:00 | BP 21.14 | Computational Approaches to Liquid-Liquid Phase Separation of Partially Disordered RS-Proteins — •Yannick Witzky, Arash Nikoubashman, and Friederike Schmid |
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11:00 | BP 21.15 | Novel DNA-based nano force sensor to measure the clustering force of membrane-proteins — •Neda Rahmani and Weria Pezeshkian |
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11:00 | BP 21.16 | Using molecular dynamics simulation as a microscope of the peptide's translocation process through an aerolysin nanopore — •Michel Mom, Kumar Sarthak, Aleksei Aksimentiev, and Christian Holm |
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11:00 | BP 21.17 | Reaction-diffusion models for growing skin patterns in cuttlefish — •Sigrid Trägenap, Feron Basoeki, and Matthias Kaschube |
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11:00 | BP 21.18 | An order-disorder transition in cortical development — •Lorenzo Butti, Nathaniel Powell, Bettina Hein, Deyue Kong, Jonas Elpelt, Haleigh Mulholland, Matthias Kaschube, and Gordon Smith. |
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11:00 | BP 21.19 | Stability of the Pore Structure of α-Latrotoxin and the Unusual Ion Transport Mechanism through a Synaptic Membrane — •Azadeh Alavizargar and Andreas Heuer |
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11:00 | BP 21.20 | Modelling contrast-variation SAXS experiments by explicit-solvent molecular dynamics — •Noora Aho and Jochen Hub |
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11:00 | BP 21.21 | Machine Learning Guided RNA Structure Prediction — •Utkarsh Upadhyay, Oskar Taubert, and Alexander Schug |
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11:00 | BP 21.22 | A NAP-XPS-study on X-ray radiation damage: Chemical changes to Gene-V Protein — •Dorothea C. Hallier, Jörg Radnik, Paul M. Dietrich, Harald Seitz, and Marc Benjamin Hahn |
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11:00 | BP 21.23 | Length Scale Selection Through Mechano-Chemical Coupling — •Antonia Winter, Yuhao Liu, Alexander Ziepke, George Dadunashvili, and Erwin Frey |
| 11:00 | BP 21.24 | The contribution has been withdrawn. | |
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11:00 | BP 21.25 | Finding (Un)binding Pathways in Protein-Ligand Systems — •Miriam Jäger and Steffen Wolf |
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11:00 | BP 21.26 | AlphaFold-driven modeling of cytochrome bd-I: A structural approach to antibiotic design — •Noah Rickermann, Jonathan Hungerland, and Ilia A. Solov'yov |
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11:00 | BP 21.27 | Binding Study of Beta-2-Glycoprotein I and Integrin-Containing Artificial Lipid Membranes — •Emma Weilbeer, Una Janke, Thomas McDonnell, and Mihaela Delcea |
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11:00 | BP 21.28 | Coarse-grained simulations of peptide Lge1(1-80) — •Agaya Johnson, Anton Polyansky, Sofia Kantorovich, and Bojan Zagrovic |
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11:00 | BP 21.29 | Non-Markovian friction dependence on intra-molecular reaction coordinates in protein folding — •Jonathan Remmert, Benjamin A. Dalton, and Roland R. Netz |
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11:00 | BP 21.30 | Electric field susceptibility of metastable proteins and implications for controlling viral propagation — •Claudia Arbeitman, Pablo Rojas, Alexander Lipskij, Pedro Ojeda-May, and Martin Garcia |
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11:00 | BP 21.31 | Role of Phase Separation in RNA co-evolution — •Samuel Santhosh Gomez, Gaetano Granatelli, and Christoph Weber |
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11:00 | BP 21.32 | Controlling transport for RNA enrichment in 2D-alkaline chimneys — •Mona Byberg Michelsen and Karen Alim |
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11:00 | BP 21.33 | Theory of RNA evolution in phase-separated systems — •Gaetano Granatelli, Samuel Santhosh Gomez, and Christoph Weber |
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11:00 | BP 21.34 | Cell-Free Gene Expression in Bioprinted Fluidic Networks — •Alexandra Bienau and Friedrich C. Simmel |